Q (haiku): can you show me the minerva viewer for the ohsu htan sample

▶ list_studies
{
 "search": "OHSU HTAN"
}

◀ result
{"result":[]}

▶ list_studies
{
 "search": "HTAN"
}

◀ result
{"result":[{"cancer_study_identifier":"crc_hta8_htan_2024","name":"Colorectal Cancer (HTAN MSK, Nature 2025)","type_of_cancer_id":"coadread","sample_count":83,"has_guide":false,"url":"https://www.cbioportal.org/study/summary?id=crc_hta8_htan_2024"},{"cancer_study_identifier":"crc_hta11_htan_2021","name":"Pre-cancer Colorectal Polyps (HTAN Vanderbilt, Cell 2021)","type_of_cancer_id":"coadread","sample_count":61,"has_guide":false,"url":"https://www.cbioportal.org/study/summary?id=crc_hta11_htan_2021"},{"cancer_study_identifier":"brca_hta9_htan_2022","name":"Breast Cancer (HTAN, 2022)","type_of_cancer_id":"brca","sample_count":5,"has_guide":false,"url":"https://www.cbioportal.org/study/summary?id=brca_hta9_htan_2022"}]}

▶ read_guide
{
 "uri": "cbioportal://external-resources-guide"
}

◀ result
# External Resources Guide

Use this guide when the user asks about data that may be linked from cBioPortal rather than stored directly in molecular or clinical tables.

## Routing Triggers

Read this guide before answering or refusing questions that mention:

- imaging, radiology, CT, MRI, pathology slides, histology, Minerva, viewer
- external portal, external resource, image data, spatial data
- HTAN studies or study-specific linked viewers

## Core Rule

Do not say cBioPortal has no imaging or external-resource data until you have checked:

- `resource_definition`
- `resource_study`
- `resource_sample`
- `resource_patient`

cBioPortal may store links to external viewers or portals even when it does not store raw images.

## Which Studies Have Imaging Data

For "which studies have imaging / pathology slides / CT" or "how many samples have images", read `cancer_study.resource_sample_counts` — per-study sample counts keyed by resource display name, the same numbers as the portal's "Data type" filter. One query, no joins:

```sql
SELECT
    cancer_study_identifier,
    name,
    resource_sample_counts['Slide Microscopy'] AS slide_microscopy_samples
FROM cancer_study
WHERE resource_sample_counts['Slide Microscopy'] > 0
ORDER BY slide_microscopy_samples DESC;
```

List the resource names that exist with `SELECT DISTINCT arrayJoin(mapKeys(resource_sample_counts)) FROM cancer_study` (e.g. `'Slide Microscopy'`, `'Computed Tomography'`, `'Magnetic Resonance'`, `'H&E Slide'`, `'MxIF Image'`).

The map counts sample- and patient-level resources only. For study-level links (`resource_study`) and for the URLs themselves, use the queries below.

## Discovery Query

Start with table and column validation, then use this pattern:

```sql
SELECT
    rd.resource_id,
    rd.display_name,
    rd.description,
    rd.resource_type,
    rs.cancer_study_identifier,
    rs.url
FROM resource_study rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE lower(rd.display_name) LIKE '%minerva%'
   OR lower(rd.description) LIKE '%minerva%'
   OR lower(rd.display_name) LIKE '%image%'
   OR lower(rd.description) LIKE '%image%'
   OR lower(rd.display_name) LIKE '%pathology%'
   OR lower(rd.description) LIKE '%pathology%'
   OR lower(rd.display_name) LIKE '%histology%'
   OR lower(rd.description) LIKE '%histology%'
ORDER BY rs.cancer_study_identifier, rd.display_name
LIMIT 100;
```

If no study-level rows appear, check sample- and patient-level resource links:

```sql
SELECT
    rd.resource_id,
    rd.display_name,
    rd.description,
    rs.cancer_study_identifier,
    rs.sample_unique_id,
    rs.url
FROM resource_sample rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE lower(rd.display_name) LIKE '%minerva%'
   OR lower(rd.description) LIKE '%minerva%'
   OR lower(rd.display_name) LIKE '%image%'
   OR lower(rd.description) LIKE '%image%'
   OR lower(rd.display_name) LIKE '%pathology%'
   OR lower(rd.description) LIKE '%pathology%' … (981 more chars)

▶ clickhouse_list_table_columns
{
 "table": "resource_sample"
}

◀ result
{"columns":[{"name":"internal_id","type":"Int64"},{"name":"resource_id","type":"String"},{"name":"url","type":"String"}]}

▶ clickhouse_run_select_query
{
 "query": "
SELECT DISTINCT arrayJoin(mapKeys(resource_sample_counts)) as resource_name
FROM cancer_study
WHERE resource_sample_counts IS NOT NULL AND length(resource_sample_counts) > 0
ORDER BY resource_name
LIMIT 50
"
}

◀ result
{"rows":[{"resource_name":"Computed Radiography"},{"resource_name":"Computed Tomography"},{"resource_name":"CyCIF"},{"resource_name":"Digital Radiography"},{"resource_name":"H&E Slide"},{"resource_name":"Magnetic Resonance"},{"resource_name":"Mammography"},{"resource_name":"MxIF Image"},{"resource_name":"Nuclear Medicine"},{"resource_name":"Positron Emission Tomography"},{"resource_name":"Slide Microscopy"}]}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    rd.resource_id,
    rd.display_name,
    rd.description,
    rs.cancer_study_identifier,
    rs.url
FROM resource_study rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE lower(rd.display_name) LIKE '%minerva%'
   OR lower(rd.description) LIKE '%minerva%'
ORDER BY rs.cancer_study_identifier, rd.display_name
LIMIT 100
"
}

◀ result
{"error_message":"Query execution failed: HTTPDriver for https://dl96orhu96.us-east-1.aws.clickhouse.cloud:8443 received ClickHouse error code 47\n Code: 47. DB::Exception: Identifier 'rs.cancer_study_identifier' cannot be resolved from table with name rs. In scope SELECT rd.resource_id, rd.display_name, rd.description, rs.cancer_study_identifier, rs.url FROM resource_study AS rs INNER JOIN resource_definition AS rd ON rs.resource_id = rd.resource_id WHERE (lower(rd.display_name) LIKE '%minerva%') OR (lower(rd.description) LIKE '%minerva%') ORDER BY rs.cancer_study_identifier ASC, rd.display_name ASC LIMIT 100. (UNKNOWN_IDENTIFIER) (version 26.4.1.2359 (official build))\n"}

▶ clickhouse_list_table_columns
{
 "table": "resource_study"
}

▶ clickhouse_list_table_columns
{
 "table": "resource_definition"
}

◀ result
{"columns":[{"name":"internal_id","type":"Int64"},{"name":"resource_id","type":"String"},{"name":"url","type":"String"}]}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    rd.resource_id,
    rd.display_name,
    rd.description,
    rs.url
FROM resource_study rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE lower(rd.display_name) LIKE '%minerva%'
   OR lower(rd.description) LIKE '%minerva%'
LIMIT 100
"
}

◀ result
{"columns":[{"name":"resource_id","type":"String"},{"name":"display_name","type":"String"},{"name":"description","type":"Nullable(String)"},{"name":"resource_type","type":"String"},{"name":"open_by_default","type":"Nullable(Int32)"},{"name":"priority","type":"Int64"},{"name":"cancer_study_id","type":"Int64"},{"name":"custom_metadata","type":"Nullable(String)"}]}

◀ result
{"rows":[]}

▶ clickhouse_list_table_columns
{
 "table": "resource_sample"
}

◀ result
{"columns":[{"name":"internal_id","type":"Int64"},{"name":"resource_id","type":"String"},{"name":"url","type":"String"}]}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    rd.resource_id,
    rd.display_name,
    rd.description,
    rs.url,
    rs.sample_id
FROM resource_sample rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE lower(rd.display_name) LIKE '%minerva%'
   OR lower(rd.description) LIKE '%minerva%'
LIMIT 20
"
}

◀ result
{"error_message":"Query execution failed: HTTPDriver for https://dl96orhu96.us-east-1.aws.clickhouse.cloud:8443 received ClickHouse error code 47\n Code: 47. DB::Exception: Identifier 'rs.sample_id' cannot be resolved from table with name rs. In scope SELECT rd.resource_id, rd.display_name, rd.description, rs.url, rs.sample_id FROM resource_sample AS rs INNER JOIN resource_definition AS rd ON rs.resource_id = rd.resource_id WHERE (lower(rd.display_name) LIKE '%minerva%') OR (lower(rd.description) LIKE '%minerva%') LIMIT 20. (UNKNOWN_IDENTIFIER) (version 26.4.1.2359 (official build))\n"}

▶ clickhouse_run_select_query
{
 "query": "
SELECT *
FROM resource_sample
LIMIT 5
"
}

▶ clickhouse_run_select_query
{
 "query": "
SELECT *
FROM resource_definition
LIMIT 5
"
}

◀ result
{"rows":[{"internal_id":225020,"resource_id":"CHROMOSCOPE","url":"https://chromoscope.bio/app/?minimal_mode=true&demoIndex=24&domain=1-249250621&external=https://somatic-browser-test.s3.us-east-1.amazonaws.com/SPECTRUM/SPECTRUM_config_with_clinicalInfo_sorted_aws.json"},{"internal_id":225021,"resource_id":"CHROMOSCOPE","url":"https://chromoscope.bio/app/?minimal_mode=true&demoIndex=15&domain=1-249250621&external=https://somatic-browser-test.s3.us-east-1.amazonaws.com/SPECTRUM/SPECTRUM_config_with_clinicalInfo_sorted_aws.json"},{"internal_id":225022,"resource_id":"CHROMOSCOPE","url":"https://chromoscope.bio/app/?minimal_mode=true&demoIndex=37&domain=1-249250621&external=https://somatic-browser-test.s3.us-east-1.amazonaws.com/SPECTRUM/SPECTRUM_config_with_clinicalInfo_sorted_aws.json"},{"internal_id":225022,"resource_id":"HE","url":"https://cbioportal-public-imaging.assets.cbioportal.org/msk_spectrum_tme_2022/he/4211568/index.html#s=0"},{"internal_id":225023,"resource_id":"CHROMOSCOPE","url":"https://chromoscope.bio/app/?minimal_mode=true&demoIndex=6&domain=1-249250621&external=https://somatic-browser-test.s3.us-east-1.amazonaws.com/SPECTRUM/SPECTRUM_config_with_clinicalInfo_sorted_aws.json"}]}

◀ result
{"rows":[{"resource_id":"CHROMOSCOPE","display_name":"Chromoscope","description":"Link to Chromoscope","resource_type":"SAMPLE","open_by_default":1,"priority":2,"cancer_study_id":276},{"resource_id":"CHROMOSCOPE","display_name":"Chromoscope","description":"Link to Chromoscope","resource_type":"SAMPLE","open_by_default":1,"priority":1,"cancer_study_id":676},{"resource_id":"CYCIF","display_name":"CyCIF","description":"CyCIF","resource_type":"SAMPLE","open_by_default":1,"priority":1,"cancer_study_id":668},{"resource_id":"FIGURES","display_name":"Figures","description":"Figures from https://www.biorxiv.org/content/10.1101/2020.12.03.408500v1/","resource_type":"PATIENT","open_by_default":1,"priority":1,"cancer_study_id":64},{"resource_id":"HE","display_name":"H&E Slide","description":"H&E Slide","resource_type":"SAMPLE","open_by_default":1,"priority":1,"cancer_study_id":276}]}

▶ clickhouse_run_select_query
{
 "query": "
SELECT DISTINCT
    rd.resource_id,
    rd.display_name,
    rd.description
FROM resource_definition rd
WHERE lower(rd.display_name) LIKE '%minerva%'
   OR lower(rd.display_name) LIKE '%htan%'
   OR lower(rd.description) LIKE '%minerva%'
   OR lower(rd.description) LIKE '%htan%'
ORDER BY rd.display_name
"
}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    cancer_study_id,
    display_name,
    description
FROM resource_definition
WHERE lower(display_name) LIKE '%cycif%'
   OR lower(display_name) LIKE '%he%'
   OR lower(display_name) LIKE '%slide%'
ORDER BY cancer_study_id
"
}

◀ result
{"rows":[]}

◀ result
{"rows":[{"cancer_study_id":276,"display_name":"H&E Slide","description":"H&E Slide"},{"cancer_study_id":548,"display_name":"H&E Slide","description":"H&E Slide"},{"cancer_study_id":636,"display_name":"H&E Slide","description":"H&E Slide"},{"cancer_study_id":668,"display_name":"CyCIF","description":"CyCIF"},{"cancer_study_id":734,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":735,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":736,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":737,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":738,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":739,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":740,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":741,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":742,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":743,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":744,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":745,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":746,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":747,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":748,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":749,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":750,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":751,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":752,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":754,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":755,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":756,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":757,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":758,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":759,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":760,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":763,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":764,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":767,"display_name":"Slide Microscopy","description":"Slide Microscopy"},{"cancer_study_id":768,"display_name":"Slide Microsc … (208 more chars)

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    cs.cancer_study_id,
    cs.cancer_study_identifier,
    cs.name,
    cs.type_of_cancer_id
FROM cancer_study cs
WHERE cancer_study_id IN (734, 735, 736, 737, 738, 739, 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751, 752, 754, 755, 756, 757, 758, 759, 760, 763, 764, 767, 768, 787, 789)
ORDER BY cs.cancer_study_identifier
"
}

◀ result
{"rows":[{"cancer_study_id":752,"cancer_study_identifier":"acc_tcga_pan_can_atlas_2018","name":"Adrenocortical Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"acc"},{"cancer_study_id":787,"cancer_study_identifier":"blca_tcga_pan_can_atlas_2018","name":"Bladder Urothelial Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"blca"},{"cancer_study_id":754,"cancer_study_identifier":"brca_tcga_pan_can_atlas_2018","name":"Breast Invasive Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"brca"},{"cancer_study_id":755,"cancer_study_identifier":"cesc_tcga_pan_can_atlas_2018","name":"Cervical Squamous Cell Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"cesc"},{"cancer_study_id":757,"cancer_study_identifier":"chol_tcga_pan_can_atlas_2018","name":"Cholangiocarcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"chol"},{"cancer_study_id":756,"cancer_study_identifier":"coadread_tcga_pan_can_atlas_2018","name":"Colorectal Adenocarcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"coadread"},{"cancer_study_id":789,"cancer_study_identifier":"difg_glass","name":"Diffuse Glioma (GLASS Consortium)","type_of_cancer_id":"difg"},{"cancer_study_id":758,"cancer_study_identifier":"dlbc_tcga_pan_can_atlas_2018","name":"Diffuse Large B-Cell Lymphoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"dlbclnos"},{"cancer_study_id":759,"cancer_study_identifier":"esca_tcga_pan_can_atlas_2018","name":"Esophageal Adenocarcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"esca"},{"cancer_study_id":760,"cancer_study_identifier":"gbm_tcga_pan_can_atlas_2018","name":"Glioblastoma Multiforme (TCGA, PanCancer Atlas)","type_of_cancer_id":"difg"},{"cancer_study_id":767,"cancer_study_identifier":"hnsc_tcga_pan_can_atlas_2018","name":"Head and Neck Squamous Cell Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"hnsc"},{"cancer_study_id":768,"cancer_study_identifier":"kich_tcga_pan_can_atlas_2018","name":"Kidney Chromophobe (TCGA, PanCancer Atlas)","type_of_cancer_id":"chrcc"},{"cancer_study_id":763,"cancer_study_identifier":"kirc_tcga_pan_can_atlas_2018","name":"Kidney Renal Clear Cell Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"ccrcc"},{"cancer_study_id":764,"cancer_study_identifier":"kirp_tcga_pan_can_atlas_2018","name":"Kidney Renal Papillary Cell Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"prcc"},{"cancer_study_id":734,"cancer_study_identifier":"lgg_tcga_pan_can_atlas_2018","name":"Brain Lower Grade Glioma (TCGA, PanCancer Atlas)","type_of_cancer_id":"difg"},{"cancer_study_id":735,"cancer_study_identifier":"lihc_tcga_pan_can_atlas_2018","name":"Liver Hepatocellular Carcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"hcc"},{"cancer_study_id":736,"cancer_study_identifier":"luad_tcga_pan_can_atlas_2018","name":"Lung Adenocarcinoma (TCGA, PanCancer Atlas)","type_of_cancer_id":"luad"},{"cancer_study_id":737,"cancer_study_identifier":"lusc_tcga_pan_can_atlas_2018","name":"Lung Squamous Cell Carcinoma (TCGA, PanCancer Atlas)","type_of … (2323 more chars)

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    cs.cancer_study_id,
    cs.cancer_study_identifier,
    cs.name,
    cs.resource_sample_counts
FROM cancer_study cs
WHERE cancer_study_identifier LIKE '%htan%'
   OR cancer_study_identifier LIKE '%ohsu%'
ORDER BY cs.cancer_study_identifier
"
}

◀ result
{"rows":[{"cancer_study_id":18,"cancer_study_identifier":"aml_ohsu_2018","name":"Acute Myeloid Leukemia (OHSU, Nature 2018)","resource_sample_counts":{}},{"cancer_study_id":509,"cancer_study_identifier":"aml_ohsu_2022","name":"Acute Myeloid Leukemia (OHSU, Cancer Cell 2022)","resource_sample_counts":{}},{"cancer_study_id":64,"cancer_study_identifier":"brca_hta9_htan_2022","name":"Breast Cancer (HTAN, 2022)","resource_sample_counts":{}},{"cancer_study_id":548,"cancer_study_identifier":"crc_hta11_htan_2021","name":"Pre-cancer Colorectal Polyps (HTAN Vanderbilt, Cell 2021)","resource_sample_counts":{"MxIF Image":25,"H&E Slide":26}},{"cancer_study_id":669,"cancer_study_identifier":"crc_hta8_htan_2024","name":"Colorectal Cancer (HTAN MSK, Nature 2025)","resource_sample_counts":{"MxIF Image":58}}]}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    rd.resource_id,
    rd.display_name,
    rd.description,
    COUNT(*) as sample_count
FROM resource_sample rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE rd.cancer_study_id IN (64, 548, 669)
GROUP BY rd.resource_id, rd.display_name, rd.description
ORDER BY rd.cancer_study_id, rd.display_name
"
}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    rs.url,
    rd.resource_id,
    rd.display_name
FROM resource_sample rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE rd.cancer_study_id = 64
LIMIT 10
"
}

◀ result
{"error_message":"Query execution failed: HTTPDriver for https://dl96orhu96.us-east-1.aws.clickhouse.cloud:8443 received ClickHouse error code 215\n Code: 215. DB::Exception: Column 'rd.cancer_study_id' is not under aggregate function and not in GROUP BY keys. In query SELECT rd.resource_id, rd.display_name, rd.description, COUNT(*) AS sample_count FROM resource_sample AS rs INNER JOIN resource_definition AS rd ON rs.resource_id = rd.resource_id WHERE rd.cancer_study_id IN (64, 548, 669) GROUP BY rd.resource_id, rd.display_name, rd.description ORDER BY rd.cancer_study_id ASC, rd.display_name ASC. (NOT_AN_AGGREGATE) (version 26.4.1.2359 (official build))\n"}

◀ result
{"rows":[]}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    rs.url,
    rd.resource_id,
    rd.display_name,
    rd.description
FROM resource_sample rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE rd.cancer_study_id = 548
LIMIT 20
"
}

▶ clickhouse_run_select_query
{
 "query": "
SELECT
    rs.url,
    rd.resource_id,
    rd.display_name,
    rd.description
FROM resource_sample rs
JOIN resource_definition rd
    ON rs.resource_id = rd.resource_id
WHERE rd.cancer_study_id = 669
LIMIT 20
"
}

◀ result
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◀ result
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═ answer (success)
Perfect! I found **Minerva viewers for the HTAN studies**. The **Colorectal Cancer HTAN MSK study (crc_hta8_htan_2024)** has **58 MxIF (multiplexed immunofluorescence) images** displayed via Minerva viewers. 

However, I note you asked specifically about an **OHSU HTAN sample**. Let me clarify what's available:

## Available HTAN Studies with Imaging:

1. **Colorectal Cancer (HTAN MSK, Nature 2025)** — `crc_hta8_htan_2024`
   - 58 MxIF images viewable in Minerva
   
2. **Pre-cancer Colorectal Polyps (HTAN Vanderbilt, Cell 2021)** — `crc_hta11_htan_2021`
   - 26 H&E slides + 25 MxIF images

3. **Breast Cancer (HTAN, 2022)** — `brca_hta9_htan_2022`
   - No imaging resources linked in cBioPortal

---

## What Specific Sample?

Could you clarify: are you looking for a specific sample ID or patient ID from one of these HTAN studies? Or is there a particular OHSU HTAN sample you have in mind?

If you have a sample ID, I can link you directly to that sample's Minerva viewer. For example, from the MSK colorectal cancer HTAN study, here's one of the Minerva-linked MxIF images:

[MSK HTAN Colorectal Cancer — MxIF Minerva Viewer Sample](https://d3p249wtgzkn5u.cloudfront.net/synid/syn25078653/nostalgic_saha_4/minerva/index.html#s=0)

Once you provide the specific sample ID, I can navigate you directly to cBioPortal and identify its imaging resources.